Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus.phenotype_ATM_minus_versus_BT_ATM_minus.cls #ATM_minus_versus_BT_ATM_minus_repos |
| Phenotype | phenotype_ATM_minus_versus_BT_ATM_minus.cls#ATM_minus_versus_BT_ATM_minus_repos |
| Upregulated in class | BT_ATM_minus |
| GeneSet | NCI_ARF6 DOWNSTREAM PATHWAY |
| Enrichment Score (ES) | -0.7726533 |
| Normalized Enrichment Score (NES) | -1.9613701 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.011722113 |
| FWER p-Value | 0.012 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | NME2 | 1448808_a_at | 2785 | 0.522 | -0.1041 | No | ||
| 2 | RAB11A | 1449256_a_at | 4088 | 0.358 | -0.1478 | No | ||
| 3 | RAC1 | 1423734_at 1437674_at 1451086_s_at | 4418 | 0.331 | -0.1482 | No | ||
| 4 | TIAM1 | 1418057_at 1444373_at 1453887_a_at | 5036 | 0.289 | -0.1636 | No | ||
| 5 | PLD1 | 1425739_at 1437112_at 1437113_s_at | 7366 | 0.165 | -0.2627 | No | ||
| 6 | GOSR2 | 1419371_s_at 1419372_at | 7408 | 0.163 | -0.2573 | No | ||
| 7 | AP2M1 | 1442227_at 1442429_at 1443338_at 1450894_a_at 1457122_at | 8607 | 0.118 | -0.3068 | No | ||
| 8 | KALRN | 1429796_at 1436066_at 1442341_at 1442554_s_at 1445900_at 1448023_at 1457690_at 1457899_at 1459065_at | 11892 | 0.007 | -0.4564 | No | ||
| 9 | PLAUR | 1452521_a_at | 13188 | -0.041 | -0.5137 | No | ||
| 10 | NME1 | 1424110_a_at 1435277_x_at | 13350 | -0.047 | -0.5190 | No | ||
| 11 | RHOA | 1437628_s_at | 14162 | -0.080 | -0.5525 | No | ||
| 12 | PLD2 | 1417237_at 1457252_x_at | 15934 | -0.166 | -0.6261 | No | ||
| 13 | AP2A1 | 1460724_at | 16075 | -0.175 | -0.6247 | No | ||
| 14 | ARF1 | 1420920_a_at 1426390_a_at | 16736 | -0.219 | -0.6452 | No | ||
| 15 | ARFGAP1 | 1427245_at 1445067_at | 16749 | -0.220 | -0.6360 | No | ||
| 16 | MAPK3 | 1427060_at | 19743 | -0.679 | -0.7427 | Yes | ||
| 17 | PIP5K1A | 1421833_at 1421834_at 1450389_s_at | 19923 | -0.737 | -0.7184 | Yes | ||
| 18 | ARFIP2 | 1424240_at 1435498_at | 19953 | -0.746 | -0.6868 | Yes | ||
| 19 | RAB11FIP3 | 1438022_at 1457864_at | 19954 | -0.747 | -0.6539 | Yes | ||
| 20 | CLTA | 1421062_s_at 1434540_a_at 1444328_at | 20614 | -1.051 | -0.6377 | Yes | ||
| 21 | GGA3 | 1438008_at | 20617 | -1.055 | -0.5912 | Yes | ||
| 22 | ARF6 | 1418822_a_at 1418823_at 1418824_at | 20976 | -1.325 | -0.5492 | Yes | ||
| 23 | CLTB | 1453063_at 1456797_at 1460740_at | 21188 | -1.559 | -0.4901 | Yes | ||
| 24 | MAPK1 | 1419568_at 1426585_s_at 1442876_at 1453104_at | 21451 | -1.949 | -0.4161 | Yes | ||
| 25 | GBF1 | 1415709_s_at 1415757_at 1432677_at 1438207_at | 21660 | -2.442 | -0.3179 | Yes | ||
| 26 | CD4 | 1419696_at 1427779_a_at | 21679 | -2.527 | -0.2074 | Yes | ||
| 27 | COPA | 1415706_at 1437274_at | 21908 | -4.967 | 0.0012 | Yes |
